Infection and Drug Resistance · 2021 · 18 citations · 16 references
We here described a ceftriaxone-resistant <i>Neisseria gonorrhoeae</i> FC428 clone (YL201) with moderate-level resistance to azithromycin in Shenzhen, South China in 2020. The NG-STAR type of YL201 is ST2238, containing a mosaic <i>penA</i>-60.001 allele, which is a typical characteristic of FC428 clone. YL201 harbours four copies of the 23S rRNA C2611T mutation, conferring moderate-level resistance to azithromycin. The MLST type is ST1600, identical with two <i>N. gonorrhoeae</i> FC428 clones identified in Hangzhou. Genome-wide phylogeny analysis demonstrates that YL201 is clustered with other FC428 clones from Hangzhou (South-east China) and Chengdu (South-west China). Isolates within this cluster have relatively higher MIC for ceftriaxone and display closely related MLST STs (ST1600 and ST7363) but are different from the ST of typical FC428 clone (ST1903). As ST1600 and ST7363 are common STs in Shenzhen, the further spread of FC428 clones may increase the severity of gonococcal resistance. In summary, identifying a multidrug-resistant (MDR) <i>N. gonorrhoeae</i> isolate in Shenzhen showed FC428 clones have undergone further transmission in China and presented more extensive and concerning antimicrobial resistance (AMR) characteristics during the spread.
16
SMS: Smart Model Selection in PhyML
Vincent Lefort, Jean-Emmanuel Longueville, Olivier Gascuel · Molecular Biology and Evolution · 2017 · 1.9K citations · Full text
Shu‐ichi Nakayama, Ken Shimuta, Keiichi Furubayashi et al. · Antimicrobial Agents and Chemotherapy · 2016 · 195 citations · Full text
Medical Microbiology, Antimicrobial Resistance Gene, Health Sciences +14