Current Protocols · 2021 · 47 citations · 13 references
EngineeringFreeze Analysis ModuleBehavior PredictionBehavior MonitoringVideo SurveillanceBehavior AnalysisVisual SurveillanceImage AnalysisKinesiologyLocation Tracking ModuleVideo Content AnalysisBiostatisticsHuman MotionHealth SciencesBehavioral SciencesVideo ObservationBehavior TrackingVideo AnalysisEye TrackingHuman-computer InteractionHuman MovementAnimal BehaviorMotion Analysis
Tracking animal behavior by video is one of the most common tasks in neuroscience. Previously, we have validated ezTrack, a free, flexible, and easy-to-use software for the analysis of animal behavior. ezTrack's Location Tracking Module can be used for the positional analysis of an individual animal and is applicable to a wide range of behavioral tasks. Separately, ezTrack's Freeze Analysis Module is designed for the analysis of defensive freezing behavior. ezTrack supports a range of desirable tools, including options for cropping and masking portions of the field of view, defining regions of interest, producing summary data for specified portions of time, algorithms to remove the influence of electrophysiology cables and other tethers, batch processing of multiple videos, and video down-sampling. Moreover, ezTrack produces a range of interactive plots and visualizations to promote users' confidence in their results. In this protocols paper, we provide step-by-step instructions for the use of ezTrack, from tips for recording behavior to instructions for using the software for video analysis. © 2021 Wiley Periodicals LLC. Basic Protocol 1: Software environment installation Basic Protocol 2: Using the Location Tracking Module Basic Protocol 3: Using the Freeze Analysis Module.
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Alexander Mathis, Pranav Mamidanna, Kevin M. Cury et al. · Nature Neuroscience · 2018 · 5.2K citations · Full text
Dance, Kinesiology, Image Analysis +14
Chaperone-mediated autophagy prevents collapse of the neuronal metastable proteome
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ezTrack: An open-source video analysis pipeline for the investigation of animal behavior
Zachary T. Pennington, Zhe Dong, Yu Feng et al. · Scientific Reports · 2019 · 231 citations · Full text