Frontiers in Aging Neuroscience · 2021 · 13 citations · 51 references
Life SciencesBioinformaticsMolecular BiologyGene ExpressionGene Expression AnalysisNeurodegenerationGenetics Of AgingMicrorna BiologyNoncoding Rna BiologyNoncoding Rna TranscriptomicsRna-protein InteractionsTranscriptomic ProfilingCircular Rna FunctionCircular RnasEnrichment AnalysisGene Expression Network AnalysisGene Ontology EnrichmentGene Ontology PredictionMicroarray AnalysisQuantitative Polymerase Chain Reaction
Postoperative cognitive dysfunction (POCD) is a common complication in elderly patients. Circular RNAs (circRNAs) may contribute to neurodegenerative diseases. However, the role of circRNAs in POCD in aged mice has not yet been reported. This study aimed to explore the potential circRNAs in a POCD model. First, a circRNA microarray was used to analyze the expression profiles. Differentially expressed circRNAs were validated using quantitative real-time polymerase chain reaction. A bioinformatics analysis was then used to construct a competing endogenous RNA (ceRNA) network. The database for annotation, visualization, and integrated discovery was used to perform Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis of circRNA-related genes. Moreover, protein-protein interactions were analyzed to predict the circRNA-regulated hub genes using the STRING and molecular complex detection plug-in of Cytoscape. Microarray screen 124 predicted circRNAs in the POCD of aged mice. We found that the up/downregulated circRNAs were involved in multiple signaling pathways. Hub genes, including Egfr and Prkacb , were identified and may be regulated by ceRNA networks. These results suggest that circRNAs are dysexpressed in the hippocampus and may contribute to POCD in aged mice.
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