Publication | Open Access
<scp>AutoMeKin2021</scp>: An open‐source program for automated reaction discovery
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Citations
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References
2021
Year
Automated Reaction DiscoveryEngineeringChemical AnalysisMolecular BiologyAutomated DiscoveryComputational ChemistryChemistryMolecular DynamicsMolecular DesignMolecular SimulationComputational BiochemistryMolecular SciencesAbstract Automekin2021Molecular ModelingBioinformaticsNew Search AlgorithmDiscovery TechniqueNatural SciencesComputational BiologySystems BiologyReaction ProcessChemical Kinetics
Abstract AutoMeKin2021 is an updated version of tsscds2018, a program for the automated discovery of reaction mechanisms ( J. Comput. Chem . 2018 , 39 , 1922). This release features a number of new capabilities: rare‐event molecular dynamics simulations to enhance reaction discovery, extension of the original search algorithm to study van der Waals complexes, use of chemical knowledge, a new search algorithm based on bond‐order time series analysis, statistics of the chemical reaction networks, a web application to submit jobs, and other features. The source code, manual, installation instructions and the website link are available at: https://rxnkin.usc.es/index.php/AutoMeKin
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