Brain Behavior and Immunity · 2021 · 31 citations · 23 references
Life SciencesGeneticsImmunologyAutoimmunityImmunogeneticsImmunopathologyAutoimmune DiseasesB Cell BiologyB-cell ResponsesHumoral ImmunityImmunogenomicsImmunoglobulin Gene RearrangementAntibody Repertoire AnalysisAntibody Repertoire SequencingB Cell DysfunctionB Cell Receptor Gene VariationB Cell Receptor Repertoire FormationB Cell Repertoire DiversityB-cell DisordersB-cell Repertoire Analysis
Myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) is a debilitating condition characterized by fatigue and post-exertional malaise, accompanied by various signs of neurological and autonomic dysfunction. ME/CFS is often triggered by an infectious episode and associated with an aberrant immune system. Here we report that ME/CFS is a disorder characterized by skewed B cell receptor gene usage. By applying a next-generation sequencing to determine the clone-based IGHV/IGHD/IGHJ repertoires, we revealed a biased usage of several IGHV genes in peripheral blood B cells from ME/CFS patients. Results of receiver operating characteristic (ROC) analysis further indicated a possibility of distinguishing patients from healthy controls, based on the skewed B cell repertoire. Meanwhile, B cell clones using IGHV3-30 and IGHV3-30-3 genes were more frequent in patients with an obvious infection-related episode at onset, and correlated to expression levels of interferon response genes in plasmablasts. Collectively, these results imply that B cell responses in ME/CFS are directed against an infectious agents or priming antigens induced before disease onset.
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ggseqlogo: a versatile R package for drawing sequence logos
Omar Wagih · Bioinformatics · 2017 · 1.1K citations
msa: an R package for multiple sequence alignment
Ulrich Bodenhofer, Enrico Bonatesta, Christoph Horejš-Kainrath et al. · Bioinformatics · 2015 · 818 citations · Full text
Immunologic abnormalities in chronic fatigue syndrome
Nancy G. Klimas, F Salvato, Robert O. Morgan et al. · Journal of Clinical Microbiology · 1990 · 470 citations · Full text
Life Sciences, Immunology, Pathology +15