Frontiers in Plant Science · 2020 · 208 citations · 102 references
AgricultureAgronomyPlant BiologyPlant BiochemistryPlant NutritionStructural BiologyIron TransportMicronutrient TransportMineral NutritionMineral Transport ProteinsNutrient TransportZinc NutritionDivalent Metal TransportHomologyMetal Transport ProteinsMultiple Sequence AlignmentNutrient Transport ProteinsNutrient Transporter GenesSequence HomologyZinc Transport Proteins
Zinc (Zn) is an essential micronutrient for plants and humans. Nearly 50 % of the agriculture soils of world are Zn-deficient. The low availability of Zn reduces the yield and quality of the crops. The zinc-regulated, iron-regulated transporter-like proteins (ZIP) family and iron-regulated transporters (IRTs) are involved in cellular uptake of Zn, its intracellular trafficking and detoxification in plants. In addition to Zn, ZIP family transporters also transport other divalent metal cations (such as Cd2+, Fe2+ and Cu2+). ZIP transporters play a crucial role in biofortification of grains with Zn. Only a very limited information is available on structural features and mechanism of Zn transport of plant ZIP family transporters. In this review, we present a detailed account on structure, function, regulations and phylogenetic relationships of plant ZIP transporters. We give an insight to structure of plant ZIPs through homology modelling and multiple sequence alignment with Bordetella bronchiseptica ZIP (BbZIP) protein whose crystal structure has been solved recently. We also provide details on ZIP transporter genes identified and characterized in rice and other plants till date. Functional characterization of plant ZIP transporters will help for the better crop yield and human health in future.
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MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura, Glen Stecher, Daniel S. Peterson et al. · Molecular Biology and Evolution · 2013 · 47.9K citations · Full text
Comparative Protein Structure Modeling Using MODELLER
Narayanan Eswar, Ben Webb, Marc A. Martı́-Renom et al. · Current Protocols in Protein Science · 2007 · 2.9K citations