Frontiers in Plant Science · 2020 · 29 citations · 74 references
Life SciencesEvolutionary BiologyPlant SciencesBiogeographyPhylogeneticsSystematicsEvolutionary RelationshipsPhylogenetic Comparative MethodsPhylogenetic Tree ReconstructionVicariance BiogeographyCrown Group EvolutionDiversification Rate AnalysisKaryotype EvolutionKaryotype VariationPlant Evolutionary HistoryPlate Tectonic ReconstructionsTectonic Plate Boundary ReconstructionTectonic Plate Divergence
Allioideae (e.g. chives, garlics, onions) comprises three mainly temperate tribes: Allieae (800 species from the northern hemisphere), Gilliesieae (80 South American species), and Tulbaghieae (26 Southern African species). We reconstructed the phylogeny of Allioideae (190 species plus 257 species from Agapanthoideae and Amaryllidoideae) based on ITS, matK, ndhF and rbcL to investigate its historical biogeography and karyotype evolution using newly generated cytomolecular data for Chilean genera Gethyum, Miersia, Solaria, and Speea. The crown group of Allioideae diversified ~ 62 Mya supporting a Gondwanic origin for the subfamily and vicariance as the cause of the intercontinental disjunction of the tribes. Our results support the hypothesis of the Indian tectonic plate carrying Allieae to northern hemisphere (‘out-of-India’ hypothesis). The colonization of the northern hemisphere (~30 Mya) is correlated with a higher diversification rate in Allium associated to stable x = 8, increase of polyploidy and the geographic expansion in Europe and North America. Tulbaghieae presented x = 6, but with numerical stability (2n = 12). In contrast, the tribe Gilliesieae (x = 6) varied considerably in genome size (associated with Robertsonian translocations), rDNA sites distribution and chromosome number. Our data indicate that evolutionary history of Allioideae tribes is linked to distinct trends of karyotype evolution.
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Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
Andrew Rambaut, Alexei J. Drummond, Dong Xie et al. · Systematic Biology · 2018 · 11.3K citations · Full text