Current Biology · 2020 · 1.5K citations · 27 references
Veterinary MedicineInfectious DiseasesMicrobiologyOutbreak InvestigationVirologyZoonotic Disease EpidemiologyEmerging ZoonosesViral InfectionsViral PathogenesisViral ZoonosesZoonotic Outbreak InvestigationZoonotic VirusesCoronavirus ZoonosesEmerging Zoonotic VirusesSars-cov-2 Infection
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
The Sequence Alignment/Map format and SAMtools
Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China
Chaolin Huang, Yeming Wang, Xingwang Li et al. · The Lancet · 2020 · 51.8K citations · Full text
MUSCLE: multiple sequence alignment with high accuracy and high throughput
R. C. Edgar · Nucleic Acids Research · 2004 · 46.5K citations · Full text