Toxins · 2020 · 37 citations · 45 references
Life SciencesBiologyMicrobiologyAquatic MicrobiologyMicrobial EcologyMicrobial TaxonomyAquatic Microbial EcologyFreshwater MicrobiologyMicrobial IdentificationMicrobial PhylogeneticsMolecular PhylogenyWater Quality MicrobiologyCyanobacteria ClassificationCyanobacterial ClassificationCyanobacterial DiversityCyanobacterial TaxonomyFreshwater CyanobacteriaFreshwater Microbial DiversityMolecular Species IdentificationPhylogenetic Tree Inference
The paper presents results from the first application of polyphasic approach in studies of field samples from Bulgaria. This approach, which combined the conventional light microscopy (LM) and molecular-genetic methods (based on PCR amplified fragments of microcystin synthetase gene mcyE), revealed that almost all microcystin-producers in the studied eutrophic waterbodies belong to the genus Microcystis. During the molecular identification of toxin-producing strains by use of HEPF × HEPR pair of primers, we obtained 57 sequences, 56 of which formed 28 strains of Microcystis, spread in six clusters of the phylogenetic tree. By LM, seven Microcystis morphospecies were identified (M. aeruginosa, M. botrys, M. flos-aquae, M. natans, M. novacekii, M. smithii, and M. wesenbergii). They showed significant morphological variability and contributed from <1% to 98% to the total biomass. All data support the earlier opinions that taxonomic revision of Microcystis is needed, proved the presence of toxigenic strains in M. aeruginosa and M. wesenbergii, and suppose their existence in M. natans. Our results demonstrated also that genetic sequencing, and the use of HEPF × HEPR pair in particular, can efficiently serve in water quality monitoring for identifying the potential risk from microcystins, even in cases of low amounts of Microcystis in the water.
45
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura, Glen Stecher, Daniel S. Peterson et al. · Molecular Biology and Evolution · 2013 · 47.9K citations · Full text
Jiří Komárek, Jan Kaštovský, Jan Mareš et al. · ASEP · 2014 · 727 citations
Life Sciences, Biology, Microbiology +16
Jaana Vaitomaa, Anne Rantala, Katrianna Halinen et al. · Applied and Environmental Microbiology · 2003 · 329 citations · Full text