Concepedia

Prion protein transcription is auto-regulated through dynamic interactions with G-quadruplex motifs in its own promoter

Prashant Pradhan, Ankit Srivastava, Jasdeep Singh, Banhi Biswas, Akanksha Saini, Ibrar Siddique, Pooja Kumari, Mohd Asim Khan, Akhilesh Mishra, Pramod Kumar Yadav,

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms · 2020 · 12 citations · 49 references

DOI

Concepts

References

49

Molecular dynamics with coupling to an external bath

Herman J. C. Berendsen, Johan P. M. Postma, Wilfred F. van Gunsteren et al. · The Journal of Chemical Physics · 1984 · 31K citations · Full text

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GROMACS: Fast, flexible, and free

David van der Spoel, Erik Lindahl, Berk Hess et al. · Journal of Computational Chemistry · 2005 · 19.1K citations

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Refinement of the AMBER Force Field for Nucleic Acids: Improving the Description of α/γ Conformers

Alberto Pérez, Ivan Marchán, Daniel Svozil et al. · Biophysical Journal · 2007 · 2.2K citations · Full text

, , +16

GRAMM-X public web server for protein-protein docking

Andrey Tovchigrechko, Ilya A. Vakser · Nucleic Acids Research · 2006 · 817 citations · Full text

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Structure of the Hybrid-2 type intramolecular human telomeric G-quadruplex in K+ solution: insights into structure polymorphism of the human telomeric sequence

Jixun Dai, Megan Carver, Chandanamali Punchihewa et al. · Nucleic Acids Research · 2007 · 553 citations · Full text

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