Nature Immunology · 2019 · 133 citations · 47 references
Life SciencesImmunologyOncologyCancer ImmunologyImmunoregulationTumor ImmunologyAntitumor T Cell ResponsesCancer ImmunotherapyCytokines In Tumor ImmunityRegulatory T CellsT Cell BiologyTumor-infiltrating LymphocytesCytokine-mediated T Cell ResponsesInterleukin-33 SignalingT Cell Infiltration EnhancementT Cell-mediated Immune ResponseT Cell-mediated Tumor ControlT-cell Mediated Immune ResponseTumor-associated Inflammation
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