Metabolic activity analyses demonstrate that Lokiarchaeon exhibits homoacetogenesis in sulfidic marine sediments

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis · Bioinformatics · 2014 · 33.3K citations · Full text

Abstract Motivation, Genetics, Genomics +21

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast, Elmar Pruesse, Pelin Yilmaz et al. · Nucleic Acids Research · 2012 · 32.2K citations · Full text

Ribosomal Rna, Genetics, Genomics +20

UPARSE: highly accurate OTU sequences from microbial amplicon reads

R. C. Edgar · Nature Methods · 2013 · 16.7K citations

Long-read Sequencing, Accurate Otu Sequences, Sequence Analysis +5

Fast and sensitive protein alignment using DIAMOND

Benjamin Buchfink, Chao Xie, Daniel H. Huson · Nature Methods · 2014 · 14.1K citations

Structural Bioinformatics, Protein Folding, Sensitive Protein Alignment +7

The carbohydrate-active enzymes database (CAZy) in 2013

Vincent Lombard, Hemalatha Golaconda Ramulu, Élodie Drula et al. · Nucleic Acids Research · 2013 · 6.3K citations · Full text

Aldo-keto Reductase, Biomolecular Structure Prediction, Glycobiology +16