eLife · 2019 · 258 citations · 53 references
Life SciencesPlant BiologyPlant SciencesInnate ImmunityPlant GeneticsPlant Molecular BiologyPlant Defense ResponsesPlant Immune ResponsesPlant Immune SignalingPlant-pathogen InteractionsResistance Gene FunctionSignal Transduction In PlantsAmino AcidsImmune Recognition ReceptorsNlr SignalingNucleotide-binding Leucine-rich Repeat ReceptorsPlant Resistance Signaling PathwaysReceptor-like Protein Resistance GenesReceptor-like ProteinsStructural Biology Of Nlrs
The molecular codes underpinning the functions of plant NLR immune receptors are poorly understood. We used in vitro Mu transposition to generate a random truncation library and identify the minimal functional region of NLRs. We applied this method to NRC4-a helper NLR that functions with multiple sensor NLRs within a Solanaceae receptor network. This revealed that the NRC4 N-terminal 29 amino acids are sufficient to induce hypersensitive cell death. This region is defined by the consensus MADAxVSFxVxKLxxLLxxEx (MADA motif) that is conserved at the N-termini of NRC family proteins and ~20% of coiled-coil (CC)-type plant NLRs. The MADA motif matches the N-terminal α1 helix of Arabidopsis NLR protein ZAR1, which undergoes a conformational switch during resistosome activation. Immunoassays revealed that the MADA motif is functionally conserved across NLRs from distantly related plant species. NRC-dependent sensor NLRs lack MADA sequences indicating that this motif has degenerated in sensor NLRs over evolutionary time.
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An efficient algorithm for large-scale detection of protein families
Anton J. Enright · Nucleic Acids Research · 2002 · 3.8K citations · Full text