International Journal of Molecular Sciences · 2019 · 48 citations · 39 references
Natural SciencesBiochemistryBiophysicsMolecular BiophysicsNanomaterialsProtein BiochemistryMolecular DynamicsProtein AdsorptionProtein Corona FormationProtein DynamicsProtein StructureProtein-ligand InteractionsBiomolecule-nanoparticle InteractionsMolecular Dynamics Of ProteinsNanoparticle AdsorptionProtein Adsorption At NanoscaleProtein Adsorption DynamicsProtein Adsorption To NanoparticlesProtein CoronaProtein-surface Interactions
A multiscale molecular dynamics simulation study has been carried out in order to provide in-depth information on the adsorption of hemoglobin, myoglobin, and trypsin over citrate-capped AuNPs of 15 nm diameter. In particular, determinants for single proteins adsorption and simultaneous adsorption of the three types of proteins considered have been studied by Coarse-Grained and Meso-Scale molecular simulations, respectively. The results, discussed in the light of the controversial experimental data reported in the current experimental literature, have provided a detailed description of the (i) recognition process, (ii) number of proteins involved in the early stages of corona formation, (iii) protein competition for AuNP adsorption, (iv) interaction modalities between AuNP and protein binding sites, and (v) protein structural preservation and alteration.
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Helen M. Berman · Nucleic Acids Research · 2000 · 39.8K citations
Improvements to the <scp>APBS</scp> biomolecular solvation software suite
Elizabeth Jurrus, Dave Engel, Keith T. Star et al. · Protein Science · 2017 · 2.5K citations · Full text
U. Klinge, Joon-Keun Park, B. Klosterhalfen · Pathobiology · 2013 · 1.8K citations · Full text