Science · 2019 · 384 citations · 38 references
Life SciencesImmunologyMicrobiologyMetabolic PhysiologyMetabolismMicrobiome ResearchGut MicrobiomeGut MicrobiotaHost-microbiome InteractionsLipid MetabolismMetabolic DiseaseMetabolic SyndromeHost Immune ControlHost-microbiota InteractionsHost-microbiota SymbiosisIncreased AdiposityInnate Immune ControlIntestinal Lipid AbsorptionMicrobiome-host InteractionsMicrobiota-driven Immune Regulation
T cells help keep you lean The gut microbiota is a critical factor regulating mammalian metabolism. The host immune system, in turn, can shape the microbiome, in part via immunoglobulin A (IgA) antibodies. Petersen et al. report that mice defective in T follicular helper cell development and gut IgA production show hallmarks of metabolic syndrome with age (see the Perspective by Wang and Hooper). These mice gain more weight, accumulate more fat, and show greater insulin resistance compared with controls. IgA in these mice inappropriately targets Clostridia species and allows for the outgrowth of Desulfovibrio. Clostridia suppress and Desulfovibrio enhance host lipid absorption by modulating CD36 expression. A better understanding of the microbial products that modulate lipid absorption may open the door to future therapies for obesity and metabolic disease. Science , this issue p. eaat9351 ; see also p. 316
38
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
Fast and sensitive protein alignment using DIAMOND
Benjamin Buchfink, Chao Xie, Daniel H. Huson · Nature Methods · 2014 · 15.2K citations
An obesity-associated gut microbiome with increased capacity for energy harvest
Peter J. Turnbaugh, Ruth E. Ley, Michael A. Mahowald et al. · Nature · 2006 · 12.4K citations
Heart disease and stroke statistics--2015 update: a report from the American Heart Association.
Dariush Mozaffarian, Emelia J. Benjamin, Alan S. Go et al. · PubMed · 2015 · 8.3K citations