Nature Microbiology · 2019 · 179 citations · 63 references
Life SciencesMicrobiologyOceanographyMarine MicrobiologyMicrobial EcologyPhycologyMarine Microbial MetabolismMicrobial BiogeochemistryMicrobial OceanographyOcean EcologyPhytoplankton EcologySulfur MetabolismBacterial-phytoplankton InteractionsHeterotrophic MetabolismMarine Bacterioplankton EcologyMarine Sulfur CycleMicrobial Connectivity In The OceanPhytoplankton Sulfur InteractionsSulfur Cycling In Marine SystemsSurface Ocean Microbiology
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Search and clustering orders of magnitude faster than BLAST
R. C. Edgar · Bioinformatics · 2010 · 21.7K citations · Full text
FLASH: fast length adjustment of short reads to improve genome assemblies
Tanja Magoč, Steven L. Salzberg · Bioinformatics · 2011 · 15.7K citations · Full text