Journal of Phycology · 2019 · 72 citations · 101 references
Life SciencesBiologyMicrobiologyMicrobial EcologyMicrobial TaxonomyPhylogeneticsMicrobial PhylogeneticsMicrobial PhylogenyMolecular PhylogenyPhylogenetic ClassificationPhylogenetic Sequence AnalysisTaxonomic Classification16S Rrna Gene PhylogenyCyanobacteria ClassificationCyanobacteria In Biological Soil CrustsCyanobacterial TaxonomyDesert Soil CrustsNew Species DescriptionPhylogenetic Character AnalysisTotal Evidence Analysis
Soil cyanobacteria are crucial components of biological soil crusts and carry out many functions in dryland ecosystems. Despite this importance, their taxonomy and population genetics remain poorly known. We isolated 42 strains of simple filamentous cyanobacteria previously identified as Pseudophormidium hollerbachianum from 26 desert locations in the North and South America and characterized these strains using a total evidence approach, that is, using both morphological and molecular data to arrive at taxonomic decisions. Based on a phylogenetic analysis of 16S rRNA gene sequences, we propose and characterize Myxacorys gen. nov. with two new species Myxacorys chilensis, the generitype, and M. californica. We also found distinct 16S-23S ITS sequence variability within species in our dataset. Especially interesting was the presence of two distinct lineages of M. californica obtained from locations in close spatial proximity (within a few meters to kilometers from each other) suggesting niche differentiation. The detection of such unrecognized lineage-level variability in soil cyanobacteria has important implications for biocrust restoration practices and conservation efforts.
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Clustal W and Clustal X version 2.0
Mark Larkin, Gordon Blackshields, Nigel P. Brown et al. · Bioinformatics · 2007 · 29.1K citations · Full text