Nature Communications · 2019 · 308 citations · 57 references
AgriculturePlant BiologyPlant SciencesCrop ImprovementPlant GeneticsPlant GenomicsAgronomic Trait EvaluationHeavy Metal Tolerance BreedingCadmium BioaccumulationCadmium Tolerance BreedingHuman Health EffectsMajor Facilitator Superfamily TransportersMissense MutationsNatural Variation AnalysisNear-isogenic Line EvaluationRoot Uptake Differences
Abstract Cadmium (Cd) accumulation in rice grain poses a serious threat to human health. While several transport systems have been reported, the complexity of rice Cd transport and accumulation indicates the necessity of identifying additional genes, especially those that are responsible for Cd accumulation divergence between indica and japonica rice subspecies. Here, we show that a gene, OsCd1 , belonging to the major facilitator superfamily is involved in root Cd uptake and contributes to grain accumulation in rice. Natural variation in OsCd1 with a missense mutation Val449Asp is responsible for the divergence of rice grain Cd accumulation between indica and japonica . Near-isogenic line tests confirm that the indica variety carrying the japonica allele OsCd1 V449 can reduce the grain Cd accumulation. Thus, the japonica allele OsCd1 V449 may be useful for reducing grain Cd accumulation of indica rice cultivars through breeding.
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Koichiro Tamura, Daniel G. Peterson, Nora Peterson et al. · Molecular Biology and Evolution · 2011 · 40.3K citations · Full text
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.
Fumio Tajima · Genetics · 1989 · 14.2K citations · Full text
Life Sciences, Biology, Genetics +13
The Phyre2 web portal for protein modeling, prediction and analysis
Lawrence A. Kelley, Stefans Mezulis, Christopher M. Yates et al. · Nature Protocols · 2015 · 10.2K citations · Full text
Empirical threshold values for quantitative trait mapping.
Gary A. Churchill, R. W. Doerge · Genetics · 1994 · 5K citations · Full text