Concepedia

High-quality MS/MS spectrum prediction for data-dependent and data-independent acquisition data analysis

Shivani Tiwary, Roie Levy, Petra Gutenbrunner, Favio Salinas Soto, Krishnan K. Palaniappan, Laura Deming, Marc Berndl, Arthur Brant, Peter Cimermančič, Jürgen Cox

Nature Methods · 2019 · 290 citations · 37 references

DOI

Concepts

References

37

Random Forests

Leo Breiman · Machine Learning · 2001 · 126.2K citations · Full text

Long Short-Term Memory

Sepp Hochreiter, Jürgen Schmidhuber · Neural Computation · 1997 · 98.1K citations

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MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

Jürgen Cox, Matthias Mann · Nature Biotechnology · 2008 · 15.7K citations

, , +15

TensorFlow: A system for large-scale machine learning

Martı́n Abadi, Paul Barham, Jianmin Chen et al. · arXiv (Cornell University) · 2016 · 8.8K citations · Full text

, , +15

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

Jürgen Cox, Nadin Neuhauser, Annette Michalski et al. · Journal of Proteome Research · 2011 · 5.9K citations · Full text

, , +17