Mitochondrial DNA Part B · 2019 · 22 citations · 7 references
Life SciencesBotanyPlant SciencesGenomicsPhylogeneticsPlant SystematicsChloroplast BiologyChloroplast GeneticsChloroplast StructureComparative Chloroplast GenomicsPhylogenetic Tree ReconstructionPhylogenomic AnalysisChloroplast Dna AnalysisChloroplast Dna PhylogenyChloroplast Genome AnalysisChloroplast Genome OrganizationChloroplast Genome StructureChloroplast Phylogenetic ReconstructionChloroplast PhylogeneticsEndemic Species Distribution
The complete chloroplast (cp) genome sequence of Acer takesimense, a member of maple tree and an endemic species to Ulleung Island of Korea, was firstly analyzed in this study. It was formed a typical circular structure of 157,023 bp in length and composed of a large single copy region (85,371 bp) and a small single copy region (18,160 bp) which were separated by two inverted repeat regions (26,746 bp). Interestingly, rps2 gene was pseudogene due to two deletions of 5 bp. In the phylogenetic tree using chloroplast genome sequence, it was clear that the genus Acer, a monophyletic group, was sister to Dipteronia in the subfamily Hippocastanoideae and A. takesimense was a sister group of A. palmatum.
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Guido W. Grimm, Susanne S. Renner, Alexandros Stamatakis et al. · Evolutionary Bioinformatics · 2006 · 64 citations · Full text