PubMed · 2018 · 30 citations · 25 references
Open access
ComputingComputer ScienceHealth InformaticsClinical InformaticsComputational LinguisticsNatural Language ProcessingAnnotationClinical DocumentationClinical Natural Language ProcessingCorpus AnnotationSemi-supervised LearningSexual HealthClinical Text AnnotationFree-text Data ExtractionHealth Outcomes AnalysisPhenotype Discovery From Clinical NotesSemi-supervised Information ExtractionSemi-supervised Relation ExtractionSemi-supervised Representation Learning
Social and behavioral determinants of health (SBDH) are environmental and behavioral factors that are increasingly recognized for their impact on health outcomes. We describe ongoing research to extract SBDH related to sexual health from clinical documentation. Our work addresses several challenges. First, there is no standard set of SBDHs for sexual health; we describe our curation of 38 such SBDHs. Second, it is unknown how SBDH related to sexual health are expressed in clinical notes; we detail the characteristics of an annotated corpus. Third, SBDH documentations are rare; we describe the use of semi-supervised learning to accelerate the annotation process by identifying notes likely to document SBDH. Fourth, we describe preliminary results to infer an array of SBDH from clinical documentation using supervised learning.
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