FEBS Journal · 2019 · 36 citations · 16 references
Life SciencesBiochemistryMolecular BiologyMolecular BiophysicsStructural BiologyStructural BiophysicsMacromolecular Structure DeterminationMolecular DynamicsProtein DynamicsProtein StructureProtein-protein Interaction AnalysisChemical Shift AnalysisMagnetic Resonance Spectroscopy Of BiomoleculesNuclear Magnetic Resonance Structure DeterminationProtein Structure AnalysisProtein-dna InteractionsThree-dimensional Nmr Spectroscopy
NMR is one of the major techniques for investigating the structure, dynamics and interactions between biomolecules. However, non-experts often experience NMR experimentation and data analysis as intimidating. We discuss a simple yet powerful NMR technique, the so-called chemical shift perturbation (CSP) analysis, as a tool to elucidate macromolecular interactions in small- and medium-sized complexes, including protein-protein, protein-drug, and protein-DNA/RNA interactions. We discuss current software packages for NMR data analysis and present a new interactive graphical tool implemented in CcpNmr AnalysisAssign version-3, which can drastically reduce the time required for the CSP analysis. Lastly, we illustrate the usefulness of a protein three-dimensional structure for interpretation of the CSP data.
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Konstantin Pervushin, Roland Riek, Gerhard Wider et al. · Proceedings of the National Academy of Sciences · 1997 · 2.5K citations · Full text