Lipids · 2019 · 21 citations · 18 references
Life SciencesCell BiologyMolecular BiologyCellular MetabolismGene ExpressionMetabolismFatty Acid MetabolismLipid BiosynthesisLipid MetabolismLipid StorageLipidomicsTriglyceride MetabolismHepatic Lipid AccumulationHepatic Lipid MetabolismLaser Capturing MicrodissectionLipid Export MechanismsLipid Metabolism Gene ExpressionLiver LipogenesisMetabolic Gene RegulationMolecular Characterization
Simple steatosis is the hallmark of nonalcoholic fatty liver disease, with lipid accumulating as either microvesicular or macrovesicular lipid droplets within hepatocytes. The present study used a combination of laser capture microdissection and RNAseq to characterize murine gene expression in nonsteatotic, microsteatotic, and macrosteatotic compartments collected from the same liver. The data indicate that microvesicular steatosis is intermediate to macrovesicular steatosis, showing a widespread and pronounced metabolic gene regulation of lipid export, gluconeogenesis, and de novo lipogenesis. Key enzymes, such as fatty acid synthase and fructose 1,6-bisphosphatase as well as apolipoprotein C-III, were identified to show clear expression differences between the compartments. Furthermore, increased expression of lipid particle formation genes provided a molecular description of the fusion of microsteatotic lipid compartments to produce macrosteatotic cells with a single enlarged lipid droplet.
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STAR: ultrafast universal RNA-seq aligner
Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 56.2K citations · Full text
Leif Väremo, Jens Nielsen, Intawat Nookaew · Nucleic Acids Research · 2013 · 747 citations · Full text
Yasuyuki Fujimoto, Hiroyuki Itabe, Jun Sakai et al. · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · 2003 · 329 citations