Delineation of the Genera Haemoproteus and Plasmodium Using RNA-Seq and Multi-gene Phylogenetics

Basic local alignment search tool

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Life Sciences, Bioinformatics, Sequence Analysis +3

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis · Bioinformatics · 2014 · 34.3K citations · Full text

Life Sciences, Bioinformatics, Biology +12

MrBayes 3: Bayesian phylogenetic inference under mixed models

Fredrik Ronquist, John P. Huelsenbeck · Bioinformatics · 2003 · 29.4K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +17

HISAT: a fast spliced aligner with low memory requirements

Daehwan Kim, Ben Langmead, Steven L. Salzberg · Nature Methods · 2015 · 26.1K citations · Full text

Engineering, Computer Engineering, Computer Science +3

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

Weizhong Li, Adam Godzik · Bioinformatics · 2006 · 12.1K citations · Full text

Life Sciences, Bioinformatics, Computational Biology +11