Concepedia

BioSimulator.jl: Stochastic simulation in Julia

Alfonso Landeros, Timothy C. Stutz, Kevin L. Keys, Alexander V. Alekseyenko, Janet S. Sinsheimer, Kenneth Lange, Mary E. Sehl

Computer Methods and Programs in Biomedicine · 2018 · 19 citations · 33 references

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References

33

Exact stochastic simulation of coupled chemical reactions

Daniel T. Gillespie · The Journal of Physical Chemistry · 1977 · 10.6K citations

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Julia: A Fresh Approach to Numerical Computing

Jeff Bezanson, Alan Edelman, Stefan Karpinski et al. · SIAM Review · 2017 · 6.3K citations

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A general method for numerically simulating the stochastic time evolution of coupled chemical reactions

Daniel T. Gillespie · Journal of Computational Physics · 1976 · 6.3K citations

, , +16

Stochastic Gene Expression in a Single Cell

Michael B. Elowitz, Arnold J. Levine, Eric D. Siggia et al. · Science · 2002 · 5.7K citations

, , +17

COPASI—a COmplex PAthway SImulator

Stefan Hoops, Sven Sahle, Ralph Gauges et al. · Bioinformatics · 2006 · 2.7K citations · Full text

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