Transcriptomic Plasticity in the Arthropod Generalist <i>Tetranychus urticae</i> Upon Long-Term Acclimation to Different Host Plants

Abstract

The two-spotted spider mite <i>Tetranychus urticae</i> is an important pest with an exceptionally broad host plant range. This generalist rapidly acclimatizes and adapts to a new host, hereby overcoming nutritional challenges and a novel pallet of constitutive and induced plant defenses. Although recent studies reveal that a broad transcriptomic response upon host plant transfer is associated with a generalist life style in arthropod herbivores, it remains uncertain to what extent these transcriptional changes are general stress responses or host-specific. In the present study, we analyzed and compared the transcriptomic changes that occur in a single <i>T. urticae</i> population upon long-term transfer from <i>Phaseolus vulgaris</i> to a similar, but chemically defended, host (cyanogenic <i>Phaseolus lunatus)</i> and to multiple economically important crops (<i>Glycine max</i>, <i>Gossypium hirsutum</i>, <i>Solanum lycopersicum</i> and <i>Zea mays</i>). These long-term host plant transfers were associated with distinct transcriptomic responses with only a limited overlap in both specificity and directionality, suggestive of a fine-tuned transcriptional plasticity. Nonetheless, analysis at the gene family level uncovered overlapping functional processes, recruiting genes from both well-known and newly discovered detoxification families. Of note, our analyses highlighted a possible detoxification role for <i>Tetranychus</i>-specific short-chain dehydrogenases and single PLAT domain proteins, and manual genome annotation showed that both families are expanded in <i>T. urticae</i> Our results shed new light on the molecular mechanisms underlying the remarkable adaptive potential for host plant use of generalist arthropods and set the stage for functional validation of important players in <i>T. urticae</i> detoxification of plant secondary metabolites.