Concepedia

Transient Osmotic Perturbation Causes Long-Term Alteration to the Gut Microbiota

Carolina Tropini, Eli L. Moss, Bryan D. Merrill, Katharine M. Ng, Steven K. Higginbottom, Ellen Casavant, Carlos G. Gonzalez, Brayon J. Fremin, Donna M. Bouley, Joshua E. Elias,

Cell · 2018 · 267 citations · 59 references

DOIFull text

Open access

Concepts

References

59

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

, , +13

Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text

, , +12

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

Cutadapt removes adapter sequences from high-throughput sequencing reads

Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text

, , +8

Search and clustering orders of magnitude faster than BLAST

R. C. Edgar · Bioinformatics · 2010 · 21.7K citations · Full text

, , +14