Biochemistry · 2018 · 76 citations · 44 references
Life SciencesBiochemistryChemistryCatalysisEnzyme MechanismEnzymologyCatalytic MechanismsCatalytic Reaction KineticsEnzyme CharacterizationEnzyme FunctionEnzyme KineticsSubstrate BindingEnzymatic Reaction MechanismsEnzyme Reaction KineticsEnzyme Reaction MechanismsPh EffectsProduct ReleaseSolvent EffectsSolvent Viscosity EffectsViscosity Effects
The study of enzyme reaction mechanisms is fundamentally important to our understanding of biochemistry, cellular metabolism, and drug development. This Perspective focuses on the use of kinetic solvent viscosity effects (KSVEs) to study enzyme reactions. This technique is easily implemented and uses steady-state kinetic analyses to probe whether substrate binding is diffusion-controlled and whether product release is the rate-limiting step in the catalytic cycle. In addition, KSVEs can identify isomerization steps that are important for catalysis. The use of KSVEs in combination with other techniques, such as kinetic isotope effects, pH effects, and site-directed mutagenesis, can provide a detailed view of the mechanism of enzyme action. We present the basic theory, important experimental considerations, and potential outcomes and briefly discuss some examples from the literature. The derivation of the equations that are important for data analysis is also presented.
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Brownian motion in a field of force and the diffusion model of chemical reactions
H. A. Kramers · Physica · 1940 · 8.6K citations
Natural Sciences, Chemistry, Physics +16
Molecular volumes and the Stokes-Einstein equation
John T. Edward · Journal of Chemical Education · 1970 · 1.8K citations