mSphere · 2018 · 17 citations · 76 references
Life SciencesMicrobiologyMolecular BiologyGene ExpressionMetabolismTranscriptional RegulationAmino Acid MetabolismCatabolite RepressionGene Regulation In MicrobesNitrogen MetabolismYeast BiologyYeast GeneticsArginine MetabolismFungal Gene RegulationFungal Transcriptional RegulationGata FactorsNitrogen Assimilation In YeastNitrogen Source UtilizationYeast Gene Expression RegulationYeast Gene Regulation
Utilization of nitrogen by fungi is controlled by n itrogen c atabolite r epression (NCR). Expression of many genes is switched off during growth on nonpreferred nitrogen sources. Gene expression is regulated through a combination of activation and repression. Nitrogen regulation has been studied best in the model yeast Saccharomyces cerevisiae . We found that although many nitrogen regulators have a conserved function in Saccharomyces species, some do not. The Dal81 transcriptional regulator has distinctly different functions in S. cerevisiae and C. parapsilosis . In the former, it regulates utilization of nitrogen from GABA and allantoin, whereas in the latter, it regulates expression of arginine synthesis genes. Our findings make an important contribution to our understanding of nitrogen regulation in a human-pathogenic fungus.
76
Differential expression analysis for sequence count data
Simon Anders, Wolfgang Huber · Genome biology · 2010 · 16.4K citations · Full text
Daehwan Kim, Geo Pertea, Cole Trapnell et al. · Genome biology · 2013 · 13.7K citations · Full text
Evolution of pathogenicity and sexual reproduction in eight Candida genomes
Geraldine Butler, Matthew D. Rasmussen, Michael Lin et al. · Nature · 2009 · 1.1K citations · Full text