Molecules · 2017 · 48 citations · 26 references
ComputingComputer ScienceOncologyData MiningFeature EngineeringMachine LearningClassificationComputational OncologyFeature SelectionOptimization For Machine LearningSupport Vector MachinesTumor ClassificationArtificial Bee ColonyFeature Selection For ClassificationOutcome PredictionParticle Swarm OptimizationRedundant FeaturesSupport Vector ClassificationSupport Vector Machine ClassificationSvms
Intelligent optimization algorithms have advantages in dealing with complex nonlinear problems accompanied by good flexibility and adaptability. In this paper, the FCBF (Fast Correlation-Based Feature selection) method is used to filter irrelevant and redundant features in order to improve the quality of cancer classification. Then, we perform classification based on SVM (Support Vector Machine) optimized by PSO (Particle Swarm Optimization) combined with ABC (Artificial Bee Colony) approaches, which is represented as PA-SVM. The proposed PA-SVM method is applied to nine cancer datasets, including five datasets of outcome prediction and a protein dataset of ovarian cancer. By comparison with other classification methods, the results demonstrate the effectiveness and the robustness of the proposed PA-SVM method in handling various types of data for cancer classification.
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BagBoosting for tumor classification with gene expression data
Marcel Dettling · Bioinformatics · 2004 · 546 citations · Full text
Computing, Biostatistics, Oncology +16