INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2018 · 33 citations · 39 references
Life SciencesBiologyMicrobiologyMicrobial TaxonomyMycologySoil Microbiology16S Ribosomal Ribonucleic Acid AnalysisBiochemical IdentificationMicrobial IdentificationMicrobial PhylogeneticsPhylogenetic ClassificationRhizosphere Microbiology16S Rrna Gene PhylogenyActinomyces PhylogenyActinomyces TaxonomyChemotaxonomic CharacterizationChemotaxonomic IdentificationCulture-based Isolation Of ActinomycesPhylogenetic Character AnalysisSequence Similarity
A novel actinomycete, designated strain NEAU-DSCPA1-4-4T, was isolated from rhizosphere soil of wheat and characterized using a polyphasic approach. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that the organism should be assigned to the genus Streptomyces . The strain formed a monophyletic clade with its closest relatives, Streptomyces ghanaensis DSM 40746T (97.7 % 16S rRNA gene sequence similarity) and Streptomyces viridosporus DSM 40243T (97.6 %). Similarly, chemotaxonomic data, including major menaquinones, fatty acid compositions and polar lipid profile, also supported the placement of strain NEAU-DSCPA1-4-4T in the genus Streptomyces . However, DNA–DNA relatedness, physiological and biochemical data showed that strain NEAU-DSCPA1-4-4T could be distinguished from its closest relatives. Therefore, we propose that strain NEAU-DSCPA1-4-4T represents a novel species of the genus Streptomyces , for which the name Streptomyces triticisoli sp. nov. is proposed, with NEAU-DSCPA1-4-4T (=CCTCC AA 2017025T=DSM 105118T) as the type strain.
39
Julie Thompson, Desmond G. Higgins, Toby J. Gibson · Nucleic Acids Research · 1994 · 64.9K citations · Full text
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura, Glen Stecher, Daniel S. Peterson et al. · Molecular Biology and Evolution · 2013 · 47.9K citations · Full text
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
Joseph Felsenstein · Evolution · 1985 · 41.5K citations · Full text