Molecular Tests That Target the RTX Locus Do Not Distinguish between Kingella kingae and the Recently Described Kingella negevensis Species

Nawal El Houmami, Janek Bzdrenga, Philippe Minodier, Hervé Seligmann, Elsa Prudent, Sofiane Bakour, Stéphane Bonacorsi, Didier Raoult, Pablo Yagupsky, Pierre‐Edouard Fournier

Journal of Clinical Microbiology · 2017 · 29 citations · 35 references

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Abstract

<i>Kingella kingae</i> is an important invasive pathogen in early childhood. The organism elaborates an RTX toxin presumably restricted to this species. Consequently, real-time quantitative PCR (qPCR) assays targeting the RTX locus have been developed in recent years and are gaining increasing use for the molecular diagnosis of <i>K. kingae</i> infections. However, the present study shows that <i>Kingella negevensis</i>, a <i>Kingella</i> species newly identified in young children, harbors an identical <i>Kingella</i> RTX locus, raising the question of whether <i>K. negevensis</i> can be misidentified as <i>K. kingae</i> by clinical microbiology laboratories. <i>In silico</i> comparison of <i>Kingella</i> sp. RTX and <i>groEL</i> genes and <i>in vitro</i> studies provided evidence that targeting the <i>rtxA</i> and <i>rtxB</i> genes could not differentiate between strains of <i>K. kingae</i> and <i>K. negevensis</i>, whereas targeting the <i>groEL</i> gene could. This prompted the design of a highly specific and sensitive qPCR assay targeting <i>K. negevensis groEL</i> (<i>kngroEL</i>). Ninety-nine culture-negative osteoarticular specimens from 99 children younger than 4 years of age were tested with a conventional 16S rRNA gene-based broad-range PCR assay and <i>Kingella</i>-specific <i>rtxB</i>, <i>K. kingae</i>-specific <i>groEL</i> (<i>kkgroEL</i>), and <i>kngroEL</i> qPCR assays. Forty-two specimens were <i>rtxB</i> positive, including 41 that were also <i>kkgroEL</i> positive and 1 (the remaining one) that was <i>kngroEL</i> positive. Thus, this study discloses an invasive infection caused by <i>K. negevensis</i> in humans and demonstrates that targeting the RTX locus cannot be used for the formal diagnosis of <i>K. kingae</i> infections. These findings stress the need for further studies on the epidemiology of asymptomatic carriage and invasive infections caused by <i>K. negevensis</i> in humans.

References

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