IEEE Transactions on Medical Imaging · 2017 · 45 citations · 39 references
MedicineComputer ScienceRadiologyBiomedical ImagingDiagnostic ImagingMachine LearningBrain ImagingDimensionality ReductionFunctional NeuroimagingMagnetic Resonance ImagingMedical ImagingRepresentation LearningBasis ExpansionBasis Function ExpansionDictionary LearningFunctional Magnetic Resonance ImagingSparsity Problem
Sequential dictionary learning algorithms have been successfully applied to functional magnetic resonance imaging (fMRI) data analysis. fMRI data sets are, however, structured data matrices with the notions of temporal smoothness in the column direction. This prior information, which can be converted into a constraint of smoothness on the learned dictionary atoms, has seldomly been included in classical dictionary learning algorithms when applied to fMRI data analysis. In this paper, we tackle this problem by proposing two new sequential dictionary learning algorithms dedicated to fMRI data analysis by accounting for this prior information. These algorithms differ from the existing ones in their dictionary update stage. The steps of this stage are derived as a variant of the power method for computing the SVD. The proposed algorithms generate regularized dictionary atoms via the solution of a left regularized rank-one matrix approximation problem where temporal smoothness is enforced via regularization through basis expansion and sparse basis expansion in the dictionary update stage. Applications on synthetic data experiments and real fMRI data sets illustrating the performance of the proposed algorithms are provided.
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The minimal preprocessing pipelines for the Human Connectome Project
Matthew F. Glasser, Stamatios N. Sotiropoulos, Joshua Wilson et al. · NeuroImage · 2013 · 5.9K citations · Full text