Concepedia

Quality of TCR signaling determined by differential affinities of enhancers for the composite BATF–IRF4 transcription factor complex

Arifumi Iwata, Vivek Durai, Roxane Tussiwand, Carlos G. Briseño, Xiaodi Wu, Gary E. Grajales‐Reyes, Takeshi Egawa, Theresa L. Murphy, Kenneth M. Murphy

Nature Immunology · 2017 · 121 citations · 40 references

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40

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

, , +17

limma powers differential expression analyses for RNA-sequencing and microarray studies

Matthew E. Ritchie, Belinda Phipson, Di Wu et al. · Nucleic Acids Research · 2015 · 43K citations · Full text

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BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text

, , +14

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead, Cole Trapnell, Mihai Pop et al. · Genome biology · 2009 · 23K citations · Full text

, , +15

An integrated encyclopedia of DNA elements in the human genome

Nature · 2012 · 19.4K citations · Full text

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