Methods in Ecology and Evolution · 2017 · 18 citations · 42 references
AgricultureEcologySoil SciencesSoil Carbon DynamicsSoil EcologySoil SciencePlant-soil Nutrient InteractionsRhizosphere ProcessesRoot EcologyRoot ExudatesRoot PhysiologyRoot SystemsExudate-mediated Nutrient AcquisitionRoot - Soil InteractionsRoot Exudate AnalysisRoot Exudate EffectsRoot Response To Nutrient AvailabilityRoot-environment InteractionsRoot-soil Interface InteractionsRoot-zone Nutrient Dynamics
Summary Root exudation is a key component of nutrient and carbon dynamics in terrestrial ecosystems. Exudation rates vary widely by plant species and environmental conditions, but our understanding of how root exudates affect soil functioning is incomplete, in part because there are few viable methods to manipulate root exudates in situ . To address this, we devised the Automated Root Exudate System (ARES), which simulates increased root exudation by applying small amounts of labile solutes at regular intervals in the field. The ARES is a gravity‐fed drip irrigation system comprising a reservoir bottle connected via a timer to a micro‐hose irrigation grid covering c . 1 m 2 ; 24 drip‐tips are inserted into the soil to 4‐cm depth to apply solutions into the rooting zone. We installed two ARES subplots within existing litter removal and control plots in a temperate deciduous woodland. We applied either an artificial root exudate solution (RE) or a procedural control solution (CP) to each subplot for 1 min day −1 during two growing seasons. To investigate the influence of root exudation on soil carbon dynamics, we measured soil respiration monthly and soil microbial biomass at the end of each growing season. The ARES applied the solutions at a rate of c . 2 L m −2 week −1 without significantly increasing soil water content. The application of RE solution had a clear effect on soil carbon dynamics, but the response varied by litter treatment. Across two growing seasons, soil respiration was 25% higher in RE compared to CP subplots in the litter removal treatment, but not in the control plots. By contrast, we observed a significant increase in microbial biomass carbon (33%) and nitrogen (26%) in RE subplots in the control litter treatment. The ARES is an effective, low‐cost method to apply experimental solutions directly into the rooting zone in the field. The installation of the systems entails minimal disturbance to the soil and little maintenance is required. Although we used ARES to apply root exudate solution, the method can be used to apply many other treatments involving solute inputs at regular intervals in a wide range of ecosystems.
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R: A Language and Environment for Statistical Computing
R Core Team · 2000 · 353K citations · Full text
Natural Sciences, Computer Science, Statistical Computing +10
Fitting Linear Mixed-Effects Models Using <b>lme4</b>
Douglas M. Bates, Martin Mächler, Benjamin M. Bolker et al. · Journal of Statistical Software · 2015 · 85.6K citations · Full text
Mineral protection of soil carbon counteracted by root exudates
Marco Keiluweit, Jeremy Bougoure, Peter Nico et al. · Nature Climate Change · 2015 · 1.1K citations · Full text
Agriculture, Agronomy, Soil Sciences +16