eNeuro · 2017 · 25 citations · 53 references
Life SciencesMolecular BiologyNeuroscienceGene ExpressionMolecular NeuroscienceTranscriptional RegulationCalcium SignalingGene Expression In NeuronsIntracellular Calcium SignalingNeural DevelopmentSynaptogenesisCalcium Ion SignalingCalcium Signaling In Neural DevelopmentCalcium Signaling In NeuronsCalcium-responsive Gene ExpressionEndoplasmic Reticulum Calcium SignalingNeuronal Calcium HandlingStore-operated Calcium EntryTranscriptional Control Elements
Abstract Calcium signaling controls many key processes in neurons, including gene expression, axon guidance, and synaptic plasticity. In contrast to calcium influx through voltage- or neurotransmitter-gated channels, regulatory pathways that control store-operated calcium entry (SOCE) in neurons are poorly understood. Here, we report a transcriptional control of Stim1 (stromal interaction molecule 1) gene, which is a major sensor of endoplasmic reticulum (ER) calcium levels and a regulator of SOCE. By using a genome-wide chromatin immunoprecipitation and sequencing approach in mice, we find that NEUROD2, a neurogenic transcription factor, binds to an intronic element within the Stim1 gene. We show that NEUROD2 limits Stim1 expression in cortical neurons and consequently fine-tunes the SOCE response upon depletion of ER calcium. Our findings reveal a novel mechanism that regulates neuronal calcium homeostasis during cortical development.
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Fast gapped-read alignment with Bowtie 2
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Gene Ontology: tool for the unification of biology
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Model-based Analysis of ChIP-Seq (MACS)
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An integrated encyclopedia of DNA elements in the human genome