Pediatric Rheumatology · 2017 · 12 citations · 38 references
Life SciencesGeneticsImmunologyAutoimmunityHuman GeneticsImmunogeneticsAutoimmune Disease PathogenesisAutoimmune Disease Susceptibility GenesAutoimmune DiseasesAutoimmune Rheumatic DiseasesGenetic Susceptibility To AutoimmunityHuman Leukocyte Antigen SystemAutoimmune Disease GeneticsCd4 Positive T CellsCross-reactive ImmunityGenetic PolymorphismsHla Genotype AssociationsHla Polymorphism AnalysisHuman Leukocyte Antigen-g ExpressionTransmission Disequilibrium Test
Rheumatic heart disease (RHD) is an autoimmune disease where cross reactive CD4 + T cells are involved in the pathogenesis of valvular damage. Human Leukocyte Antigen-G (HLA-G), an immunosuppressive molecule playing a crucial role in the inhibition of T cell response is associated with the pathogenesis of various autoimmune and inflammatory diseases. Genetic polymorphisms within the 3′untranslated region (UTR) of HLA-G influences its expression and thus disease pathogenesis. Hence, the present study aims to unravel the association of 14 bp Ins/Del (rs66554220) and +3142 C / G (rs1063320) polymorphisms in 3′ UTR of HLA-G with RHD. This familial study consists of 99 RHD families (99 RHD patients, 140 parents and 126 healthy siblings). The 14 bp Ins/Del and +3142 C / G polymorphisms were evaluated by PCR using sequence specific primers and its transmission disequilibrium (TD) was tested by TD test in 70 trio families. The frequency of +3142 C/C genotype was high in patients with combined valvular lesions (CVL) (OR = 5.88; p c = 0.012) and pooled RHD patients (P: OR = 2.76; p = 0.043; p c = 0.076) when compared to healthy siblings. Under the additive (OR = 5.50; p c = 0.026) and recessive genetic model (OR = 5.88; p c = 0.012), the +3142 C/C genotype was significantly associated with CVL in patients. The results suggest that the +3142 C/C genotype may be associated with minor risk for the development of RHD and is more likely to influence the severity of the disease.
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Haploview: analysis and visualization of LD and haplotype maps
Jeffrey C. Barrett, Ben Fry, Julian Maller et al. · Bioinformatics · 2004 · 14.7K citations · Full text