Concepedia

Comparative genomics of canine-isolated Leishmania (Leishmania) amazonensis from an endemic focus of visceral leishmaniasis in Governador Valadares, southeastern Brazil

Hugo O. Valdivia, Laila Viana de Almeida, Bruno Mendes Roatt, João Luís Reis-Cunha, Agnes Antônia Sampaio Pereira, Célia Maria Ferreira Gontijo, Ricardo Toshio Fujiwara, Alexandre Barbosa Reis, Mandy Sanders, James A. Cotton,

Scientific Reports · 2017 · 81 citations · 50 references

DOIFull text

Open access

References

50

Basic local alignment search tool

Stephen F. Altschul, Warren Gish, Webb Miller et al. · Journal of Molecular Biology · 1990 · 92.8K citations

, , +10

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 66.2K citations · Full text

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 64.7K citations · Full text

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 58.3K citations · Full text

, , +7

MUSCLE: multiple sequence alignment with high accuracy and high throughput

R. C. Edgar · Nucleic Acids Research · 2004 · 45.3K citations · Full text

, , +17