Concepedia

Transcriptome sequencing reveals genetic mechanisms underlying the transition between the laying and brooding phases and gene expression changes associated with divergent reproductive phenotypes in chickens

Xu Shen, Xue Bai, Jin Xu, Min Zhou, H.P. Xu, Qinghua Nie, Xuemei Lu, Xiquan Zhang

Molecular Biology Reports · 2016 · 45 citations · 54 references

Concepts

Reproductive SuccessDevelopmental BiologyGeneticsEvolutionary BiologyGenomic MechanismGene Expression ChangesBrooding PhasesMolecular GeneticsGenetic VariationGenomicsReproductive BiologyEmbryonic DevelopmentMedicineFunctional GenomicsAnimal GeneticsEmbryologyDivergent Reproductive Phenotypes

References

54

Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing

Yoav Benjamini, Yosef Hochberg · Journal of the Royal Statistical Society Series B (Statistical Methodology) · 1995 · 105.5K citations

Engineering, Statistical Foundation, Powerful Approach +21

Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 60.7K citations · Full text

Mapping and quantifying mammalian transcriptomes by RNA-Seq

A Mortazavi, Brian A. Williams, Kenneth McCue et al. · Nature Methods · 2008 · 14K citations

Functional Genomics, Genetics, Transcriptomics Technology +7

Fast and accurate long-read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2010 · 12.5K citations · Full text

Abstract Motivation, Genetics, Molecular Biology +17

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

Likun Wang, Zhixing Feng, Xi Wang et al. · Bioinformatics · 2009 · 4.8K citations · Full text