Environmental Science & Technology · 2015 · 81 citations · 41 references
Life SciencesMicrobiologyToxicologyAquatic MicrobiologyAquatic ToxicologyMetagenomicsAquatic Microbial EcologyFreshwater MicrobiologyHarmful Algal Bloom ToxinsHarmful Algal BloomsPeptide AnalysisPlankton BloomsAntibacterial PeptidesBloom-forming CyanobacteriaCyclic PeptidesFreshwater CyanobacteriaLiquid Chromatography-mass SpectrometryLiquid Chromatography-mass Spectrometry AnalysisNetworkingTandem Mass Spectrometry
Cyanotoxins obtained from a freshwater cyanobacterial collection at Green Lake, Seattle during a cyanobacterial harmful algal bloom in the summer of 2014 were studied using a new approach based on molecular networking analysis of liquid chromatography tandem mass spectrometry (LC-MS/MS) data. This MS networking approach is particularly well-suited for the detection of new cyanotoxin variants and resulted in the discovery of three new cyclic peptides, namely microcystin-MhtyR (6), which comprised about half of the total microcystin content in the bloom, and ferintoic acids C (12) and D (13). Structure elucidation of 6 was aided by a new microscale methylation procedure. Metagenomic analysis of the bloom using the 16S-ITS rRNA region identified Microcystis aeruginosa as the predominant cyanobacterium in the sample. Fragments of the putative biosynthetic genes for the new cyanotoxins were also identified, and their sequences correlated to the structure of the isolated cyanotoxins.
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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
James R. Cole, Qi Wang, Erick Cardenas et al. · Nucleic Acids Research · 2008 · 4.9K citations · Full text