Concepedia

Selection on different genes with equivalent functions: the convergence story told by Hox genes along the evolution of aquatic mammalian lineages

Mariana F. Nery, Brunno Borges, Aline Cutrim Dragalzew, Tiana Kohlsdorf

BMC Evolutionary Biology · 2016 · 20 citations · 63 references

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References

63

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis · Bioinformatics · 2014 · 33.3K citations · Full text

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PAML 4: Phylogenetic Analysis by Maximum Likelihood

Molecular Biology and Evolution · 2007 · 14.3K citations · Full text

Prediction of complete gene structures in human genomic DNA

Chris Burge, Samuel Karlin · Journal of Molecular Biology · 1997 · 4.3K citations

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

Mikita Suyama, David Torrents, Peer Bork · Nucleic Acids Research · 2006 · 3.4K citations · Full text

Bayes Empirical Bayes Inference of Amino Acid Sites Under Positive Selection

Ziheng Yang · Molecular Biology and Evolution · 2005 · 2.4K citations · Full text