mSphere · 2018 · 14 citations · 26 references
Life SciencesGeneticsMicrobiologyGene RegulationMicrobial EvolutionMicrobial GeneticsBacterial EvolutionBacterial Gene RegulationBacterial MotilityGene Regulation In MicrobesMicrobial Gene Regulatory NetworksMolecular Evolution In MicrobesDynamic RegulationGene Regulation In BacteriaMotility AdaptationPhenotypic RegulationPseudomonas FluorescensPseudomonas SpeciesRegulatorsSwimming Motility
Microbes often display finely tuned patterns of gene regulation across different environments, with major regulatory changes controlled by a small group of “master” regulators within each cell. AmrZ is a master regulator of gene expression across pseudomonads and can be either a positive or negative regulator for a variety of pathways depending on the strain and genomic context. Here, we demonstrate that the phenotypic outcomes of regulation of swimming motility by AmrZ have switched at least twice independently in pseudomonads, so that AmrZ promotes increased swimming motility in P. stutzeri and P. syringae but represses this phenotype in Pseudomonas fluorescens and Pseudomonas aeruginosa . Since examples of switches in regulatory mode are relatively rare, further investigation into the mechanisms underlying shifts in regulator function for AmrZ could provide unique insights into the evolution of bacterial regulatory proteins.
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R: A Language and Environment for Statistical Computing
R Core Team · 2000 · 353K citations · Full text
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Clustal W and Clustal X version 2.0
Mark Larkin, Gordon Blackshields, Nigel P. Brown et al. · Bioinformatics · 2007 · 29.1K citations · Full text
Optimality and evolutionary tuning of the expression level of a protein
Adaptive prediction of environmental changes by microorganisms
Amir Mitchell, Gal Hagit Romano, Bella Groisman et al. · Nature · 2009 · 605 citations
Life Sciences, Biology, Microbiology +10