Genome Announcements · 2016 · 46 citations · 11 references
Life SciencesGeneticsInfectious DiseasesGenomicsMolecular VirologyVirologyGenome SequencingUntranslated RegionsViral GeneticsViral Genome OrganizationViral GenomicsVirus Genome OrganizationGuillain-barré Syndrome PathogenesisNeurological Viral InfectionsPathogen ReservoirsViral Genome AssemblyViral Untranslated Regions
Zika virus is an emerging human pathogen of great concern due to putative links to microcephaly and Guillain-Barre syndrome. Here, we report the complete genomes, including the 5' and 3' untranslated regions, of five Zika virus isolates, one from the Asian lineage and four from the African lineage.
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Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
Cutadapt removes adapter sequences from high-throughput sequencing reads
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Quality control and preprocessing of metagenomic datasets
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Zika Virus Associated with Microcephaly
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