ACS Synthetic Biology · 2014 · 61 citations · 69 references
Life SciencesBiotechnologyGeneticsGenetic EngineeringMicrobial GeneticsSynthetic BiologyMicrobial Synthetic BiologyOperon OrganizationSynthetic Biology For MicrobesSynthetic Gene DesignSynthetic Pathway ConstructionSynthetic Promoter DesignConstitutive PromotersOperon ArchitectureOperon EngineeringPromotersSynthetic Operon ConstructionSynthetic Operon DesignSynthetic Promoter ConstructionSynthetic Promoter Engineering
The discipline of synthetic biology requires standardized tools and genetic elements to construct novel functionalities in microorganisms; yet, many model systems still lack such tools. Here, we describe a novel set of vectors that allows the convenient construction of synthetic operons in Methylobacterium extorquens AM1, an important alphaproteobacterial model organism for methylotrophy and a promising platform organism for methanol-based biotechnology. In addition, we provide a set of constitutive alphaproteobacterial promoters of different strengths that were characterized in detail by two approaches: on the single-cell scale and on the cell population level. Finally, we describe a straightforward strategy to deliver synthetic constructs to the genome of M. extorquens AM1 and other Alphaproteobacteria. This study defines a new standard to systematically characterize genetic parts for their use in M. extorquens AM1 by using single-cell fluorescence microscopy and opens the toolbox for synthetic biological applications in M. extorquens AM1 and other alphaproteobacterial model systems.
69
Fiji: an open-source platform for biological-image analysis
Johannes Schindelin, Ignacio Arganda‐Carreras, Erwin Frise et al. · Nature Methods · 2012 · 70.9K citations
Enzymatic assembly of DNA molecules up to several hundred kilobases
Daniel G. Gibson, Lei Young, Ray-Yuan Chuang et al. · Nature Methods · 2009 · 10.9K citations