Journal of Chemical Theory and Computation · 2013 · 126 citations · 53 references
Natural SciencesChemistryComputational ChemistrySurface ChemistryTheoretical ChemistryCatalytic MechanismsEnergy MinimizationPotential Energy SurfacesReaction Mechanism ModelingReaction PathwaysSurface CatalysisCatalytic Surface ReactionsGas-phase ReactionsMinimum Energy PathwaysPotential Energy Surface AnalysisSurface Reaction PathwaysTransition State ModelingTransition State SearchTransition State Structure
Toward the activity prediction with large-scale computations, here a double-ended surface walking (DESW) method is developed for connecting two minima on a potential energy surface (PES) and locating the associated transition state (TS) using only the first derivatives. The method operates two images starting from the initial and the final states, respectively, to walk in a stepwise manner toward each other. The surface walking involves repeated bias potential addition and local relaxation with the constrained Broyden dimer method to correct the walking direction. We apply the method to a model PES, a large set of gas phase Baker reactions, and complex surface catalytic reactions, which demonstrates that the DESW method can establish a low energy pathway linking two minima even without iterative optimization of the pathway, from which the TS can be located readily. By comparing the efficiency of the new method with the existing methods, we show that the DESW method is much less computationally demanding and is applicable for reactions with complex PESs. We hope that the DESW method may be integrated with the PES sampling methods for automated reaction prediction.
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Generalized Gradient Approximation Made Simple
John P. Perdew, Kieron Burke, Matthias Ernzerhof · Physical Review Letters · 1996 · 211.5K citations · Full text
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