Journal of Proteome Research · 2014 · 17 citations · 49 references
PharmacyBiochemistryToxicologyBiochemical ToxicologyMechanisms Of ToxicityProteomicsAquatic EcotoxicologyBiomarkers Of ToxicityCancer ProteomicsMass Spectrometry-based ProteomicsMolecular Mechanisms Of ToxicityProteomic ProfilingExpression Fold Change AnalysisFold Change AnalysisGeneral Stress ResponseLiquid Chromatography-mass SpectrometryLiquid Chromatography-mass Spectrometry AnalysisProtein Abundance ProfilingProtein Expression ProfilingProteomics In Toxicology
Among pollutants released into the environment by human activities, residues of pharmaceuticals are an increasing matter of concern because of their potential impact on ecosystems. The aim of this study was to analyze differences of protein expression resulting from acute (2 days) and middle-term (7 days) exposure of aquatic microcrustacean Daphnia pulex to the anticancer drug tamoxifen. Using a liquid chromatography-mass spectrometry shotgun approach, about 4000 proteins could be identified, providing the largest proteomics data set of D. pulex published up to now. Considering both time points and tested concentrations, 189 proteins showed a significant fold change. The identity of regulated proteins suggested a decrease in translation, an increase in protein degradation and changes in carbohydrate and lipid metabolism as the major effects of the drug. Besides these impacted processes, which reflect a general stress response of the organism, some other regulated proteins play a role in Daphnia reproduction. These latter results are in accordance with our previous observations of the impact of tamoxifen on D. pulex reproduction and illustrate the potential of ecotoxicoproteomics to unravel links between xenobiotic effects at the biochemical and organismal levels. Data are available via ProteomeXchange with identifier PXD001257.
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Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment
Jürgen Cox, Nadin Neuhauser, Annette Michalski et al. · Journal of Proteome Research · 2011 · 5.9K citations · Full text
Jürgen Cox, Marco Y. Hein, Christian A. Luber et al. · Molecular & Cellular Proteomics · 2014 · 5.5K citations · Full text