Analytical Chemistry · 2015 · 72 citations · 46 references
Life SciencesBiochemistryAnalytical ChemistryMetabolismMetabolomicsMetabolite AnnotationMetabolite IdentificationMetabolite ProfilingMetabolite QuantificationMetabolomics Data AnalysisNuclear Magnetic Resonance MetabolomicsCalibration Curve ApproachChemical Shift AnalysisMetabolite Data ProcessingMetabolomics DatabasesNuclear Magnetic Resonance QuantificationNuclear Magnetic Resonance Spectroscopy Data AnalysisNuclear Magnetic Resonance Spectroscopy-based AnnotationNuclear Magnetic Resonance Spectroscopy-based Metabolite Profiling
A new Web-based tool, SpinCouple, which is based on the accumulation of a two-dimensional (2D) (1)H-(1)H J-resolved NMR database from 598 metabolite standards, has been developed. The spectra include both J-coupling and (1)H chemical shift information; those are applicable to a wide array of spectral annotation, especially for metabolic mixture samples that are difficult to label through the attachment of (13)C isotopes. In addition, the user-friendly application includes an absolute-quantitative analysis tool. Good agreement was obtained between known concentrations of 20-metabolite mixtures versus the calibration curve-based quantification results obtained from 2D-Jres spectra. We have examined the web tool availability using nine series of biological extracts, obtained from animal gut and waste treatment microbiota, fish, and plant tissues. This web-based tool is publicly available via http://emar.riken.jp/spincpl.
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