Canadian Journal of Fisheries and Aquatic Sciences · 2014 · 81 citations · 60 references
Life SciencesEcologyZoologyFish EcologyMarine EcologyPopulation EcologyAnimal EcologyEcological ModelingFisheries EcologyMarine Ecosystem ModelingPopulation ModelingSpatial Distribution AnalysisClimate Change Impacts On HabitatClimate Change Impacts On Marine FaunaEcological Impact PredictionEnvironmental FactorsSeasonal Distribution PatternsSeasonal Occurrence StudySpecies Abundance ModelingTemperature-driven Distribution
Increased commercial importance of spiny dogfish (Squalus acanthias) combined with an often debated, and controversial, ecological impact has warranted an investigation of the relationship among distribution, environment, and prey to better understand the species ecology and inform management. To elucidate mechanisms behind distributional changes, we modeled seasonal occurrence and abundance of neonate, immature, and mature spiny dogfish as functions of abiotic and biotic factors using generalized additive models and Northeast Fisheries Science Center bottom trawl survey data. Significant nonlinear relationships were widespread throughout dogfish stages and seasons. Seasonal occurrence was tightly linked to depth and bottom temperature, with year and Julian day influential for some stages. While these factors also influenced abundance, ecological factors (e.g., squid abundances) significantly contributed to trends for many stages. Potential impacts of climate change were evaluated by forecasting distributions under different temperature scenarios, which revealed higher regional probabilities of occurrence for most stages during a warmer than average year. Our results can be used to better understand the relationship between sampling periods and movement drivers to survey catchability of the population in the Northeast (US) shelf large marine ecosystem.
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pROC: an open-source package for R and S+ to analyze and compare ROC curves
Xavier Robin, Natacha Turck, Alexandre Hainard et al. · BMC Bioinformatics · 2011 · 14K citations · Full text
Richard A. Brown, Trevor Hastie, Robert Tibshirani · Biometrics · 1991 · 8.3K citations
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Jane Elith, John R. Leathwick, Trevor Hastie · Journal of Animal Ecology · 2008 · 6.5K citations · Full text
Computing, Biostatistics, Ecology +14