Genome Announcements · 2013 · 22 citations · 12 references
Plant Growth-promoting RhizobacteriumEngineeringGeneticsPlant PathologyGenomicsPlant HealthPlant-rhizobia InteractionMicrobial EcologyStrain Au-p3Plant Growth-promoting RhizobacteriaRhizosphereDraft Genome SequencePlant-microbe InteractionBiologyPea PlantMicrobiologyMedicinePlant PhysiologyMicrobial Genetics
Plant growth-promoting rhizobacteria (PGPR), found in the rhizospheric region of plants, not only suppress plant disease, but also directly improve plant health by improving the availability of nutrients and by providing phytostimulants. Herein, we report the high-quality genome sequence of Serratia fonticola strain AU-P3(3), a PGPR of the pea plant, which confers phosphate solubilization, indole-3-acetic acid production, ammonia production, hydrogen cyanide (HCN) production, and siderophore production and also confers activity against Rhizoctonia species. The 5.02-Mb genome sequence contains genes related to plant growth promotion and biocontrol activities.
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The RAST Server: Rapid Annotations using Subsystems Technology
Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.5K citations · Full text
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
Karin Lagesen, Peter F. Hallin, Einar Andreas Rødland et al. · Nucleic Acids Research · 2007 · 6.2K citations · Full text
Engineering, Ribosomal Rna, Genetics +18
Scaffolding pre-assembled contigs using SSPACE
Marten Boetzer, Christiaan V. Henkel, Hans J. Jansen et al. · Bioinformatics · 2010 · 2.4K citations · Full text