SIAM Journal on Scientific and Statistical Computing · 1984 · 2.5K citations · 40 references
PharmacyBiochemistryBiomolecular ModelingMass Spectrometric AnalysisStructure-activity RelationshipsPrincipal Component AnalysisQuantitative Structure-activity RelationshipsCross-validationIndependent VariablesJackknife Variance EstimationLinear RegressionMultiple RegressionPartial Least Squares RegressionPrincipal Component RegressionRidge Regression
Partial least squares (PLS) is used to address collinearity among predictors in multiple regression and is equivalent to the conjugate gradient method in numerical analysis. The authors estimate successive PLS components by iteratively regressing residuals, determine the optimal rank via cross‑validation, compute jackknife standard errors, and compare the method to ridge regression and principal components regression on a chemical activity dataset.
The use of partial least squares (PLS) for handling collinearities among the independent variables X in multiple regression is discussed. Consecutive estimates $({\text{rank }}1,2,\cdots )$ are obtained using the residuals from previous rank as a new dependent variable y. The PLS method is equivalent to the conjugate gradient method used in Numerical Analysis for related problems. To estimate the “optimal” rank, cross validation is used. Jackknife estimates of the standard errors are thereby obtained with no extra computation. The PLS method is compared with ridge regression and principal components regression on a chemical example of modelling the relation between the measured biological activity and variables describing the chemical structure of a set of substituted phenethylamines.
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Ridge Regression: Biased Estimation for Nonorthogonal Problems
Arthur E. Hoerl, Robert W. Kennard · Technometrics · 1970 · 8.9K citations
Ridge Regression: Biased Estimation for Nonorthogonal Problems
Arthur E. Hoerl, Robert W. Kennard · Technometrics · 2000 · 6.6K citations
Gerald J. Hahn, Norman R. Draper, Harry Smith · Technometrics · 1982 · 5.8K citations